Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Mir686-201ENSMUST00000102174 109 ntBASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Gm14028-201ENSMUST00000117434 479 ntBASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Gm14277-201ENSMUST00000121195 360 ntBASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Gm12715-201ENSMUST00000121430 1128 ntBASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Gm18212-201ENSMUST00000211678 889 ntBASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 D9Wsu149-201ENSMUST00000214169 594 ntBASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd1Q9D0E3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Gm8213-201ENSMUST00000118191 441 ntBASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Gm25927-201ENSMUST00000175058 117 ntBASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Gm21769-201ENSMUST00000211922 111 ntBASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd1Q9D0E3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Gm13047-201ENSMUST00000117116 815 ntBASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Gm12217-201ENSMUST00000118858 696 ntBASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Mir6927-201ENSMUST00000184494 71 ntBASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lysmd1Q9D0E3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 Gm4986-201ENSMUST00000119731 549 ntBASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 Gm25261-201ENSMUST00000157416 134 ntBASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 Gm8546-201ENSMUST00000178288 1264 ntBASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lysmd1Q9D0E3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms