Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Gm12260-201ENSMUST00000122447 411 ntBASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Gm18246-201ENSMUST00000221023 728 ntBASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Shmt2Q9CZN7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shmt2Q9CZN7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Shmt2Q9CZN7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shmt2Q9CZN7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Shmt2Q9CZN7 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shmt2Q9CZN7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Shmt2Q9CZN7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shmt2Q9CZN7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shmt2Q9CZN7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Gm15467-201ENSMUST00000120582 445 ntBASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Gm8000-201ENSMUST00000188378 592 ntBASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.95□□□□□ -0.18
Shmt2Q9CZN7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms