Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Gm25925-201ENSMUST00000158314 306 ntBASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 AV356131-201ENSMUST00000206201 750 ntBASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Chchd1Q9CQA6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Chchd1Q9CQA6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Chchd1Q9CQA6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Mxra8os-201ENSMUST00000097740 687 ntBASIC11□□□□□ -0.65
Chchd1Q9CQA6 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chchd1Q9CQA6 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms