Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Gm27459-201ENSMUST00000184860 107 ntBASIC14.32□□□□□ -0.12
Trim8Q99PJ2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Trim8Q99PJ2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Gm18489-201ENSMUST00000172565 551 ntBASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Gm6089-201ENSMUST00000197666 938 ntBASIC14.31□□□□□ -0.12
Trim8Q99PJ2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim8Q99PJ2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Gm5864-201ENSMUST00000202263 970 ntBASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms