Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Gm5187-201ENSMUST00000117317 991 ntBASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Gm11628-201ENSMUST00000117568 171 ntBASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.09■□□□□ 0.01
Col25a1Q99MQ5 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col25a1Q99MQ5 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.08■□□□□ 0
Col25a1Q99MQ5 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Col25a1Q99MQ5 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Gm9182-201ENSMUST00000217829 639 ntBASIC15.08■□□□□ 0
Col25a1Q99MQ5 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.08■□□□□ 0
Col25a1Q99MQ5 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col25a1Q99MQ5 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col25a1Q99MQ5 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Mir877-201ENSMUST00000104738 85 ntBASIC15.07■□□□□ 0
Col25a1Q99MQ5 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.07■□□□□ 0
Col25a1Q99MQ5 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Mir8109-201ENSMUST00000184375 117 ntBASIC15.07■□□□□ 0
Col25a1Q99MQ5 Gm27486-201ENSMUST00000184923 80 ntBASIC15.07■□□□□ 0
Col25a1Q99MQ5 Gm7783-201ENSMUST00000204795 781 ntBASIC15.07■□□□□ 0
Col25a1Q99MQ5 Gm18054-201ENSMUST00000207539 555 ntBASIC15.07■□□□□ 0
Col25a1Q99MQ5 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.07■□□□□ 0
Col25a1Q99MQ5 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms