Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.18□□□□□ -0.14
Rnf111Q99ML9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Gm43514-201ENSMUST00000198852 424 ntBASIC14.17□□□□□ -0.14
Rnf111Q99ML9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Gm5867-201ENSMUST00000063197 592 ntBASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf111Q99ML9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Gm6443-201ENSMUST00000203599 874 ntBASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Gm18246-201ENSMUST00000221023 728 ntBASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf111Q99ML9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms