Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Gm12008-201ENSMUST00000117791 755 ntBASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Gm7230-201ENSMUST00000173026 815 ntBASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Gm6550-201ENSMUST00000187574 993 ntBASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkd1Q99MH6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Gm11764-201ENSMUST00000120221 623 ntBASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Gm23547-201ENSMUST00000158210 271 ntBASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Gm45167-201ENSMUST00000208007 322 ntBASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkd1Q99MH6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkd1Q99MH6 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkd1Q99MH6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms