Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.82□□□□□ -0.36
Scrt1Q99M85 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.81□□□□□ -0.36
Scrt1Q99M85 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.81□□□□□ -0.36
Scrt1Q99M85 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.81□□□□□ -0.36
Scrt1Q99M85 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Gm28630-201ENSMUST00000187806 498 ntBASIC12.81□□□□□ -0.36
Scrt1Q99M85 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.81□□□□□ -0.36
Scrt1Q99M85 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.81□□□□□ -0.36
Scrt1Q99M85 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.81□□□□□ -0.36
Scrt1Q99M85 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.81□□□□□ -0.36
Scrt1Q99M85 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.81□□□□□ -0.36
Scrt1Q99M85 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.81□□□□□ -0.36
Scrt1Q99M85 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scrt1Q99M85 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Gm6912-201ENSMUST00000117218 544 ntBASIC12.8□□□□□ -0.36
Scrt1Q99M85 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.8□□□□□ -0.36
Scrt1Q99M85 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.8□□□□□ -0.36
Scrt1Q99M85 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.8□□□□□ -0.36
Scrt1Q99M85 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Scrt1Q99M85 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms