Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Gm27646-201ENSMUST00000183989 110 ntBASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cttnbp2nlQ99LJ0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cttnbp2nlQ99LJ0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Gm12644-201ENSMUST00000119935 606 ntBASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Gm6296-201ENSMUST00000222599 943 ntBASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cttnbp2nlQ99LJ0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cttnbp2nlQ99LJ0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cttnbp2nlQ99LJ0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms