Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Gm2651-201ENSMUST00000203560 838 ntBASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Gm8749-201ENSMUST00000117737 331 ntBASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Gm13464-201ENSMUST00000119418 935 ntBASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf3Q99LI7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Gm13597-201ENSMUST00000121239 375 ntBASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf3Q99LI7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms