Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm29310-201ENSMUST00000185468 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm21825-201ENSMUST00000185728 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm29109-201ENSMUST00000185895 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm21896-201ENSMUST00000186520 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm21873-201ENSMUST00000186728 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm21794-201ENSMUST00000187056 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm21880-201ENSMUST00000187275 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm21826-201ENSMUST00000187451 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm21198-201ENSMUST00000188393 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm21749-201ENSMUST00000189343 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm21901-201ENSMUST00000189568 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm29424-201ENSMUST00000189716 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm28599-201ENSMUST00000189838 694 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm21867-201ENSMUST00000189917 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm29269-201ENSMUST00000190087 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm21722-201ENSMUST00000190153 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm28423-201ENSMUST00000190701 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm21899-201ENSMUST00000190745 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm21910-201ENSMUST00000191163 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm21849-201ENSMUST00000191571 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm28678-201ENSMUST00000191593 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm20910-201ENSMUST00000193268 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm21871-201ENSMUST00000194621 696 ntBASIC18.63■□□□□ 0.57
Usp16Q99LG0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp16Q99LG0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Usp16Q99LG0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Gm8410-201ENSMUST00000117225 605 ntBASIC18.62■□□□□ 0.57
Usp16Q99LG0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Gm28630-201ENSMUST00000187806 498 ntBASIC18.62■□□□□ 0.57
Usp16Q99LG0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp16Q99LG0 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.62■□□□□ 0.57
Usp16Q99LG0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp16Q99LG0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Auts2-212ENSMUST00000178555 309 ntBASIC18.61■□□□□ 0.57
Usp16Q99LG0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.61■□□□□ 0.57
Usp16Q99LG0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp16Q99LG0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp16Q99LG0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms