Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Smarcd2Q99JR8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smarcd2Q99JR8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smarcd2Q99JR8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smarcd2Q99JR8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smarcd2Q99JR8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smarcd2Q99JR8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Smarcd2Q99JR8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Smarcd2Q99JR8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Smarcd2Q99JR8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Gm15393-201ENSMUST00000120499 219 ntBASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Gm18624-201ENSMUST00000220966 658 ntBASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
Smarcd2Q99JR8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Gm10275-202ENSMUST00000168697 495 ntBASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Gm10275-201ENSMUST00000092620 635 ntBASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd2Q99JR8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Gm15460-201ENSMUST00000118147 391 ntBASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Mir6392-201ENSMUST00000184924 108 ntBASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Gm19220-201ENSMUST00000222682 803 ntBASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd2Q99JR8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms