Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Gm8749-201ENSMUST00000117737 331 ntBASIC13.03□□□□□ -0.32
Thumpd1Q99J36 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Gm9726-201ENSMUST00000180321 678 ntBASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Gm27704-201ENSMUST00000185094 107 ntBASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.03□□□□□ -0.32
Thumpd1Q99J36 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd1Q99J36 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Thumpd1Q99J36 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Thumpd1Q99J36 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Thumpd1Q99J36 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Thumpd1Q99J36 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Thumpd1Q99J36 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Thumpd1Q99J36 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Thumpd1Q99J36 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Thumpd1Q99J36 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Gm14042-201ENSMUST00000120139 833 ntBASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Gm37153-201ENSMUST00000193637 231 ntBASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Gm9682-201ENSMUST00000197505 556 ntBASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd1Q99J36 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Gm4535-201ENSMUST00000182274 558 ntBASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Gm10355-201ENSMUST00000097146 517 ntBASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms