Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha2Q91Y17 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha2Q91Y17 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha2Q91Y17 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha2Q91Y17 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha2Q91Y17 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha2Q91Y17 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha2Q91Y17 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha2Q91Y17 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha2Q91Y17 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdha2Q91Y17 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha2Q91Y17 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Gm6415-201ENSMUST00000118488 348 ntBASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha2Q91Y17 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Gm12134-201ENSMUST00000122109 520 ntBASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Gm28630-201ENSMUST00000187806 498 ntBASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha2Q91Y17 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha2Q91Y17 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha2Q91Y17 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Pcdha2Q91Y17 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha2Q91Y17 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha2Q91Y17 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha2Q91Y17 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha2Q91Y17 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Gm5566-201ENSMUST00000116118 459 ntBASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha2Q91Y17 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms