Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdha3Q91Y16 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdha3Q91Y16 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdha3Q91Y16 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdha3Q91Y16 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdha3Q91Y16 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.27■□□□□ 0.03
Pcdha3Q91Y16 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdha3Q91Y16 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.27■□□□□ 0.03
Pcdha3Q91Y16 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdha3Q91Y16 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdha3Q91Y16 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdha3Q91Y16 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Gm18737-201ENSMUST00000173594 937 ntBASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Chchd1-203ENSMUST00000224633 557 ntBASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha3Q91Y16 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha3Q91Y16 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms