Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb1Q91Y08 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb1Q91Y08 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb1Q91Y08 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhb1Q91Y08 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb1Q91Y08 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb1Q91Y08 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb1Q91Y08 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdhb1Q91Y08 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb1Q91Y08 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb1Q91Y08 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb1Q91Y08 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb1Q91Y08 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb1Q91Y08 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb1Q91Y08 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Gm20553-201ENSMUST00000204205 844 ntBASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Gm10175-201ENSMUST00000086013 645 ntBASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb1Q91Y08 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Gm27525-201ENSMUST00000184465 107 ntBASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Gm37230-201ENSMUST00000194491 818 ntBASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb1Q91Y08 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms