Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb8Q91XZ2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Pcdhb8Q91XZ2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb8Q91XZ2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb8Q91XZ2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb8Q91XZ2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb8Q91XZ2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb8Q91XZ2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb8Q91XZ2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb8Q91XZ2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
Pcdhb8Q91XZ2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb8Q91XZ2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb8Q91XZ2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb8Q91XZ2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhb8Q91XZ2 Gm8749-201ENSMUST00000117737 331 ntBASIC14.27□□□□□ -0.13
Pcdhb8Q91XZ2 Gm1401-201ENSMUST00000122048 772 ntBASIC14.27□□□□□ -0.13
Pcdhb8Q91XZ2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb8Q91XZ2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb8Q91XZ2 Gm9726-201ENSMUST00000180321 678 ntBASIC14.27□□□□□ -0.13
Pcdhb8Q91XZ2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb8Q91XZ2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb8Q91XZ2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb8Q91XZ2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb8Q91XZ2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb8Q91XZ2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb8Q91XZ2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdhb8Q91XZ2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb8Q91XZ2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdhb8Q91XZ2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb8Q91XZ2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb8Q91XZ2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb8Q91XZ2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Gm16026-204ENSMUST00000162652 683 ntBASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb8Q91XZ2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms