Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
StrcQ8VIM6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
StrcQ8VIM6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
StrcQ8VIM6 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
StrcQ8VIM6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
StrcQ8VIM6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.04■□□□□ 0.32
StrcQ8VIM6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
StrcQ8VIM6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
StrcQ8VIM6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
StrcQ8VIM6 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
StrcQ8VIM6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.04■□□□□ 0.32
StrcQ8VIM6 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
StrcQ8VIM6 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC17.04■□□□□ 0.32
StrcQ8VIM6 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC17.04■□□□□ 0.32
StrcQ8VIM6 Gm43818-201ENSMUST00000200605 466 ntBASIC17.04■□□□□ 0.32
StrcQ8VIM6 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC17.04■□□□□ 0.32
StrcQ8VIM6 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
StrcQ8VIM6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
StrcQ8VIM6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
StrcQ8VIM6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
StrcQ8VIM6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
StrcQ8VIM6 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
StrcQ8VIM6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC17.03■□□□□ 0.32
StrcQ8VIM6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
StrcQ8VIM6 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.03■□□□□ 0.32
StrcQ8VIM6 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
StrcQ8VIM6 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
StrcQ8VIM6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
StrcQ8VIM6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
StrcQ8VIM6 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.03■□□□□ 0.32
StrcQ8VIM6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
StrcQ8VIM6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
StrcQ8VIM6 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
StrcQ8VIM6 Gm24420-201ENSMUST00000176676 59 ntBASIC17.03■□□□□ 0.32
StrcQ8VIM6 Gm44985-201ENSMUST00000206202 1016 ntBASIC17.03■□□□□ 0.32
StrcQ8VIM6 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC17.03■□□□□ 0.32
StrcQ8VIM6 Cts7-204ENSMUST00000225321 1257 ntBASIC17.03■□□□□ 0.32
StrcQ8VIM6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
StrcQ8VIM6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
StrcQ8VIM6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
StrcQ8VIM6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
StrcQ8VIM6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
StrcQ8VIM6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
StrcQ8VIM6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
StrcQ8VIM6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
StrcQ8VIM6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
StrcQ8VIM6 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
StrcQ8VIM6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
StrcQ8VIM6 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.02■□□□□ 0.31
StrcQ8VIM6 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
StrcQ8VIM6 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
StrcQ8VIM6 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.02■□□□□ 0.31
StrcQ8VIM6 Gm37466-201ENSMUST00000195692 652 ntBASIC17.02■□□□□ 0.31
StrcQ8VIM6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.02■□□□□ 0.31
StrcQ8VIM6 Gm6334-201ENSMUST00000207083 228 ntBASIC17.02■□□□□ 0.31
StrcQ8VIM6 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC17.02■□□□□ 0.31
StrcQ8VIM6 Mettl6-204ENSMUST00000227595 1027 ntBASIC17.02■□□□□ 0.31
StrcQ8VIM6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
StrcQ8VIM6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
StrcQ8VIM6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
StrcQ8VIM6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
StrcQ8VIM6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
StrcQ8VIM6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
StrcQ8VIM6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.01■□□□□ 0.31
StrcQ8VIM6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.01■□□□□ 0.31
StrcQ8VIM6 Gm1335-201ENSMUST00000121653 386 ntBASIC17.01■□□□□ 0.31
StrcQ8VIM6 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
StrcQ8VIM6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.01■□□□□ 0.31
StrcQ8VIM6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.01■□□□□ 0.31
StrcQ8VIM6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.01■□□□□ 0.31
StrcQ8VIM6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
StrcQ8VIM6 Gm15371-201ENSMUST00000117057 784 ntBASIC17■□□□□ 0.31
StrcQ8VIM6 Gm13342-201ENSMUST00000121055 207 ntBASIC17■□□□□ 0.31
StrcQ8VIM6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17■□□□□ 0.31
StrcQ8VIM6 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC17■□□□□ 0.31
StrcQ8VIM6 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17■□□□□ 0.31
StrcQ8VIM6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17■□□□□ 0.31
StrcQ8VIM6 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
StrcQ8VIM6 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC17■□□□□ 0.31
StrcQ8VIM6 Gm44616-201ENSMUST00000206417 1732 ntBASIC17■□□□□ 0.31
StrcQ8VIM6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
StrcQ8VIM6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms