Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.11□□□□□ -0.31
Odf4Q8VI88 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Odf4Q8VI88 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.11□□□□□ -0.31
Odf4Q8VI88 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.11□□□□□ -0.31
Odf4Q8VI88 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Odf4Q8VI88 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.11□□□□□ -0.31
Odf4Q8VI88 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Odf4Q8VI88 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Gm27300-201ENSMUST00000184085 97 ntBASIC13.1□□□□□ -0.31
Odf4Q8VI88 Gm27335-201ENSMUST00000184758 97 ntBASIC13.1□□□□□ -0.31
Odf4Q8VI88 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.1□□□□□ -0.31
Odf4Q8VI88 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Odf4Q8VI88 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms