Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim60Q8VI40 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.11■□□□□ 0.01
Trim60Q8VI40 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.11■□□□□ 0.01
Trim60Q8VI40 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.11■□□□□ 0.01
Trim60Q8VI40 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim60Q8VI40 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim60Q8VI40 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.1■□□□□ 0.01
Trim60Q8VI40 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Gm10060-201ENSMUST00000212002 111 ntBASIC15.1■□□□□ 0.01
Trim60Q8VI40 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.1■□□□□ 0.01
Trim60Q8VI40 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim60Q8VI40 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms