Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.15□□□□□ -0.3
Rab40bQ8VHP8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40bQ8VHP8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40bQ8VHP8 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.15□□□□□ -0.3
Rab40bQ8VHP8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rab40bQ8VHP8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40bQ8VHP8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40bQ8VHP8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rab40bQ8VHP8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40bQ8VHP8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40bQ8VHP8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab40bQ8VHP8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rab40bQ8VHP8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rab40bQ8VHP8 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Gm12644-201ENSMUST00000119935 606 ntBASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Gm12895-201ENSMUST00000122214 226 ntBASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Gm9726-201ENSMUST00000180321 678 ntBASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Gm27357-201ENSMUST00000183754 135 ntBASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Gm27704-201ENSMUST00000185094 107 ntBASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Rab40bQ8VHP8 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Gm8749-201ENSMUST00000117737 331 ntBASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Gm9682-201ENSMUST00000197505 556 ntBASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rab40bQ8VHP8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40bQ8VHP8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Rab40bQ8VHP8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40bQ8VHP8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms