Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Gm8655-201ENSMUST00000221159 852 ntBASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpa1Q8VEE4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Gm27867-201ENSMUST00000184778 125 ntBASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpa1Q8VEE4 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Rpa1Q8VEE4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms