Protein–RNA interactions for Protein: Q8VE99

Ccdc115, Coiled-coil domain-containing protein 115, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc115Q8VE99 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Gm11780-201ENSMUST00000136880 516 ntBASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc115Q8VE99 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc115Q8VE99 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Gm10499-201ENSMUST00000174094 934 ntBASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc115Q8VE99 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms