Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.6■□□□□ 0.41
Ccdc9Q8VC31 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc9Q8VC31 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc9Q8VC31 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.6■□□□□ 0.41
Ccdc9Q8VC31 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.6■□□□□ 0.41
Ccdc9Q8VC31 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ccdc9Q8VC31 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc9Q8VC31 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc9Q8VC31 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc9Q8VC31 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccdc9Q8VC31 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc9Q8VC31 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc9Q8VC31 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc9Q8VC31 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc9Q8VC31 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc9Q8VC31 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc9Q8VC31 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Gm7002-201ENSMUST00000221386 2165 ntBASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Gm7049-201ENSMUST00000223520 1712 ntBASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Mir6982-201ENSMUST00000184354 68 ntBASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc9Q8VC31 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc9Q8VC31 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc9Q8VC31 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Ccdc9Q8VC31 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc9Q8VC31 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc9Q8VC31 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc9Q8VC31 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.58■□□□□ 0.4
Ccdc9Q8VC31 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc9Q8VC31 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc9Q8VC31 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc9Q8VC31 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc9Q8VC31 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc9Q8VC31 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc9Q8VC31 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.58■□□□□ 0.4
Ccdc9Q8VC31 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc9Q8VC31 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc9Q8VC31 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc9Q8VC31 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Gm43799-201ENSMUST00000201845 579 ntBASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc9Q8VC31 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc9Q8VC31 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc9Q8VC31 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc9Q8VC31 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc9Q8VC31 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc9Q8VC31 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms