Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm13464-201ENSMUST00000119418 935 ntBASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Gm12350-201ENSMUST00000121208 462 ntBASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps39Q8R5L3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Gm2651-201ENSMUST00000203560 838 ntBASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps39Q8R5L3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms