Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup58Q8R332 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nup58Q8R332 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nup58Q8R332 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup58Q8R332 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nup58Q8R332 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup58Q8R332 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup58Q8R332 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Nup58Q8R332 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup58Q8R332 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nup58Q8R332 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nup58Q8R332 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.65■□□□□ 0.1
Nup58Q8R332 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Nup58Q8R332 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Nup58Q8R332 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.65■□□□□ 0.1
Nup58Q8R332 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nup58Q8R332 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Gm14140-201ENSMUST00000119999 995 ntBASIC15.65■□□□□ 0.1
Nup58Q8R332 Gm12260-201ENSMUST00000122447 411 ntBASIC15.65■□□□□ 0.1
Nup58Q8R332 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Gm27628-201ENSMUST00000184911 107 ntBASIC15.65■□□□□ 0.1
Nup58Q8R332 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nup58Q8R332 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.65■□□□□ 0.1
Nup58Q8R332 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Nup58Q8R332 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup58Q8R332 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.64■□□□□ 0.1
Nup58Q8R332 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.64■□□□□ 0.09
Nup58Q8R332 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Nup58Q8R332 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Nup58Q8R332 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Nup58Q8R332 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Nup58Q8R332 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Nup58Q8R332 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Nup58Q8R332 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Nup58Q8R332 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.64■□□□□ 0.09
Nup58Q8R332 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup58Q8R332 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup58Q8R332 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup58Q8R332 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup58Q8R332 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup58Q8R332 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup58Q8R332 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.63■□□□□ 0.09
Nup58Q8R332 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup58Q8R332 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Nup58Q8R332 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup58Q8R332 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Nup58Q8R332 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup58Q8R332 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup58Q8R332 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.63■□□□□ 0.09
Nup58Q8R332 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.63■□□□□ 0.09
Nup58Q8R332 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.63■□□□□ 0.09
Nup58Q8R332 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nup58Q8R332 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nup58Q8R332 Gm7787-201ENSMUST00000216858 688 ntBASIC15.63■□□□□ 0.09
Nup58Q8R332 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup58Q8R332 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup58Q8R332 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup58Q8R332 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Nup58Q8R332 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Nup58Q8R332 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms