Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim29Q8R2Q0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim29Q8R2Q0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim29Q8R2Q0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trim29Q8R2Q0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim29Q8R2Q0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim29Q8R2Q0 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.68■□□□□ 0.26
Trim29Q8R2Q0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim29Q8R2Q0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim29Q8R2Q0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim29Q8R2Q0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim29Q8R2Q0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Trim29Q8R2Q0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim29Q8R2Q0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim29Q8R2Q0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim29Q8R2Q0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim29Q8R2Q0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim29Q8R2Q0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim29Q8R2Q0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Gm9385-201ENSMUST00000117563 472 ntBASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Gm15467-201ENSMUST00000120582 445 ntBASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim29Q8R2Q0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Gm2451-201ENSMUST00000199447 999 ntBASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Gm10290-201ENSMUST00000200451 999 ntBASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Gm9182-201ENSMUST00000217829 639 ntBASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Gm5867-201ENSMUST00000063197 592 ntBASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms