Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Ighv5-13-201ENSMUST00000193550 290 ntBASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Gm6916-202ENSMUST00000205523 195 ntBASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp7Q8R1T1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Gm5763-201ENSMUST00000155951 1530 ntBASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Gm28760-201ENSMUST00000185995 736 ntBASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Gm9797-201ENSMUST00000052902 613 ntBASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp7Q8R1T1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Gm14127-201ENSMUST00000117906 678 ntBASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Gm21854-201ENSMUST00000179901 471 ntBASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Gm18018-201ENSMUST00000198273 408 ntBASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Chmp7Q8R1T1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp7Q8R1T1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Chmp7Q8R1T1 BC037039-201ENSMUST00000192003 2205 ntBASIC18.58■□□□□ 0.57
Chmp7Q8R1T1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms