Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Gm18489-201ENSMUST00000172565 551 ntBASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Gm11780-201ENSMUST00000136880 516 ntBASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd3Q8R1N4 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Gm27357-201ENSMUST00000183754 135 ntBASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd3Q8R1N4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms