Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rpp40Q8R1F9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Gm38294-201ENSMUST00000192831 381 ntBASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Gm44872-201ENSMUST00000207864 420 ntBASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpp40Q8R1F9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 Gm8410-201ENSMUST00000117225 605 ntBASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 AA543401-201ENSMUST00000164248 1269 ntBASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 Gm28630-201ENSMUST00000187806 498 ntBASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpp40Q8R1F9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms