Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Gm18737-201ENSMUST00000173594 937 ntBASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sf3a1Q8K4Z5 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sf3a1Q8K4Z5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Gm45098-201ENSMUST00000207179 657 ntBASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Gm5867-201ENSMUST00000063197 592 ntBASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sf3a1Q8K4Z5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms