Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Gm6623-201ENSMUST00000173570 544 ntBASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Gm43799-201ENSMUST00000201845 579 ntBASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf4Q8K4J2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf4Q8K4J2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ebf4Q8K4J2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Ebf4Q8K4J2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf4Q8K4J2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ebf4Q8K4J2 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf4Q8K4J2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Ebf4Q8K4J2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.3□□□□□ -0.28
Ebf4Q8K4J2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Ebf4Q8K4J2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf4Q8K4J2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf4Q8K4J2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf4Q8K4J2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms