Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Gm24513-201ENSMUST00000174964 138 ntBASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rfwd3Q8CIK8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Gm11025-201ENSMUST00000140773 466 ntBASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfwd3Q8CIK8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms