Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rbm28Q8CGC6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Gm18049-201ENSMUST00000208909 581 ntBASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rbm28Q8CGC6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Rbm28Q8CGC6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rbm28Q8CGC6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rbm28Q8CGC6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.27■□□□□ 0.35
Rbm28Q8CGC6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rbm28Q8CGC6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rbm28Q8CGC6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rbm28Q8CGC6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 Gm13015-201ENSMUST00000118674 204 ntBASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 Gm27618-201ENSMUST00000183671 60 ntBASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rbm28Q8CGC6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Gm13223-201ENSMUST00000118609 747 ntBASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Gm29541-201ENSMUST00000191351 678 ntBASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rbm28Q8CGC6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbm28Q8CGC6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms