Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
ShfQ8CG80 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ShfQ8CG80 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.03□□□□□ -0.32
ShfQ8CG80 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.03□□□□□ -0.32
ShfQ8CG80 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ShfQ8CG80 Gm21362-201ENSMUST00000194272 928 ntBASIC13.03□□□□□ -0.32
ShfQ8CG80 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.03□□□□□ -0.32
ShfQ8CG80 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.03□□□□□ -0.32
ShfQ8CG80 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ShfQ8CG80 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ShfQ8CG80 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
ShfQ8CG80 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
ShfQ8CG80 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
ShfQ8CG80 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ShfQ8CG80 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ShfQ8CG80 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ShfQ8CG80 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ShfQ8CG80 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShfQ8CG80 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ShfQ8CG80 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShfQ8CG80 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.02□□□□□ -0.33
ShfQ8CG80 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.02□□□□□ -0.33
ShfQ8CG80 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShfQ8CG80 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.02□□□□□ -0.33
ShfQ8CG80 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShfQ8CG80 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShfQ8CG80 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ShfQ8CG80 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ShfQ8CG80 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ShfQ8CG80 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ShfQ8CG80 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShfQ8CG80 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShfQ8CG80 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ShfQ8CG80 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShfQ8CG80 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ShfQ8CG80 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ShfQ8CG80 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.01□□□□□ -0.33
ShfQ8CG80 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
ShfQ8CG80 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Gm16026-204ENSMUST00000162652 683 ntBASIC13.01□□□□□ -0.33
ShfQ8CG80 Gm27300-201ENSMUST00000184085 97 ntBASIC13.01□□□□□ -0.33
ShfQ8CG80 Gm27335-201ENSMUST00000184758 97 ntBASIC13.01□□□□□ -0.33
ShfQ8CG80 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Gm9182-201ENSMUST00000217829 639 ntBASIC13.01□□□□□ -0.33
ShfQ8CG80 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ShfQ8CG80 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
ShfQ8CG80 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ShfQ8CG80 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ShfQ8CG80 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ShfQ8CG80 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13□□□□□ -0.33
ShfQ8CG80 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShfQ8CG80 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShfQ8CG80 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShfQ8CG80 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ShfQ8CG80 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ShfQ8CG80 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms