Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Mir8102-201ENSMUST00000184148 139 ntBASIC17.98■□□□□ 0.47
Smc4Q8CG47 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Gm38294-201ENSMUST00000192831 381 ntBASIC17.98■□□□□ 0.47
Smc4Q8CG47 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.98■□□□□ 0.47
Smc4Q8CG47 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.98■□□□□ 0.47
Smc4Q8CG47 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.98■□□□□ 0.47
Smc4Q8CG47 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smc4Q8CG47 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc4Q8CG47 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Gm27989-201ENSMUST00000184721 107 ntBASIC17.97■□□□□ 0.47
Smc4Q8CG47 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.97■□□□□ 0.47
Smc4Q8CG47 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc4Q8CG47 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc4Q8CG47 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc4Q8CG47 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Smc4Q8CG47 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc4Q8CG47 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Smc4Q8CG47 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smc4Q8CG47 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc4Q8CG47 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.96■□□□□ 0.47
Smc4Q8CG47 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smc4Q8CG47 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc4Q8CG47 Gm44344-201ENSMUST00000200287 129 ntBASIC17.96■□□□□ 0.47
Smc4Q8CG47 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc4Q8CG47 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc4Q8CG47 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Smc4Q8CG47 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc4Q8CG47 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc4Q8CG47 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Smc4Q8CG47 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.96■□□□□ 0.46
Smc4Q8CG47 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Smc4Q8CG47 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Smc4Q8CG47 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.95■□□□□ 0.46
Smc4Q8CG47 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc4Q8CG47 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc4Q8CG47 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.95■□□□□ 0.46
Smc4Q8CG47 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smc4Q8CG47 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc4Q8CG47 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smc4Q8CG47 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc4Q8CG47 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Smc4Q8CG47 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc4Q8CG47 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc4Q8CG47 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms