Protein–RNA interactions for Protein: Q8CFI2

Cdc34, Ubiquitin-conjugating enzyme E2 R1, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc34Q8CFI2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Gm13312-201ENSMUST00000119631 718 ntBASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Gm8318-201ENSMUST00000182954 872 ntBASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.73□□□□□ -0.53
Cdc34Q8CFI2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdc34Q8CFI2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdc34Q8CFI2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms