Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.98■□□□□ 0.31
Vps53Q8CCB4 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Gm43767-201ENSMUST00000198933 381 ntBASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Gm43125-201ENSMUST00000201724 730 ntBASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Gm20553-201ENSMUST00000204205 844 ntBASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps53Q8CCB4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.96■□□□□ 0.31
Vps53Q8CCB4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps53Q8CCB4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps53Q8CCB4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps53Q8CCB4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps53Q8CCB4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps53Q8CCB4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Vps53Q8CCB4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vps53Q8CCB4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.96■□□□□ 0.31
Vps53Q8CCB4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Vps53Q8CCB4 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.96■□□□□ 0.31
Vps53Q8CCB4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps53Q8CCB4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps53Q8CCB4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Vps53Q8CCB4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Vps53Q8CCB4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps53Q8CCB4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vps53Q8CCB4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Vps53Q8CCB4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vps53Q8CCB4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vps53Q8CCB4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps53Q8CCB4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps53Q8CCB4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps53Q8CCB4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps53Q8CCB4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps53Q8CCB4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.95■□□□□ 0.3
Vps53Q8CCB4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps53Q8CCB4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps53Q8CCB4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.95■□□□□ 0.3
Vps53Q8CCB4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.95■□□□□ 0.3
Vps53Q8CCB4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.95■□□□□ 0.3
Vps53Q8CCB4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Vps53Q8CCB4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps53Q8CCB4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps53Q8CCB4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps53Q8CCB4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.95■□□□□ 0.3
Vps53Q8CCB4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps53Q8CCB4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps53Q8CCB4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms