Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Gm13464-201ENSMUST00000119418 935 ntBASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Gm4535-201ENSMUST00000182274 558 ntBASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Gm37153-201ENSMUST00000193637 231 ntBASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Gm18669-201ENSMUST00000216049 778 ntBASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Gm10355-201ENSMUST00000097146 517 ntBASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd4Q8CC84 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lysmd4Q8CC84 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lysmd4Q8CC84 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lysmd4Q8CC84 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd4Q8CC84 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd4Q8CC84 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd4Q8CC84 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Lysmd4Q8CC84 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd4Q8CC84 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.07□□□□□ -0.32
Lysmd4Q8CC84 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd4Q8CC84 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd4Q8CC84 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Lysmd4Q8CC84 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd4Q8CC84 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd4Q8CC84 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd4Q8CC84 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd4Q8CC84 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd4Q8CC84 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd4Q8CC84 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd4Q8CC84 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd4Q8CC84 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms