Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Uba3Q8C878 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Uba3Q8C878 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Uba3Q8C878 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Uba3Q8C878 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.39■□□□□ 0.05
Uba3Q8C878 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Uba3Q8C878 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.39■□□□□ 0.05
Uba3Q8C878 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.39■□□□□ 0.05
Uba3Q8C878 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.39■□□□□ 0.05
Uba3Q8C878 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Uba3Q8C878 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.39■□□□□ 0.05
Uba3Q8C878 Olfr286-202ENSMUST00000205305 969 ntBASIC15.39■□□□□ 0.05
Uba3Q8C878 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Uba3Q8C878 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.39■□□□□ 0.05
Uba3Q8C878 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Uba3Q8C878 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Uba3Q8C878 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Uba3Q8C878 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Uba3Q8C878 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Uba3Q8C878 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Uba3Q8C878 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Uba3Q8C878 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Uba3Q8C878 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Uba3Q8C878 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Uba3Q8C878 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Uba3Q8C878 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Uba3Q8C878 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.39■□□□□ 0.05
Uba3Q8C878 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Uba3Q8C878 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
Uba3Q8C878 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Uba3Q8C878 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Uba3Q8C878 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Uba3Q8C878 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Uba3Q8C878 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Uba3Q8C878 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Uba3Q8C878 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Uba3Q8C878 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Uba3Q8C878 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.38■□□□□ 0.05
Uba3Q8C878 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Uba3Q8C878 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Uba3Q8C878 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.38■□□□□ 0.05
Uba3Q8C878 Mir6990-201ENSMUST00000183724 91 ntBASIC15.38■□□□□ 0.05
Uba3Q8C878 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Uba3Q8C878 Gm45098-201ENSMUST00000207179 657 ntBASIC15.38■□□□□ 0.05
Uba3Q8C878 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Uba3Q8C878 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.38■□□□□ 0.05
Uba3Q8C878 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Uba3Q8C878 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Uba3Q8C878 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Uba3Q8C878 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Uba3Q8C878 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Uba3Q8C878 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Uba3Q8C878 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Uba3Q8C878 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Uba3Q8C878 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.38■□□□□ 0.05
Uba3Q8C878 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Uba3Q8C878 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Uba3Q8C878 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.37■□□□□ 0.05
Uba3Q8C878 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Gm26308-201ENSMUST00000157768 69 ntBASIC15.37■□□□□ 0.05
Uba3Q8C878 Gm43125-201ENSMUST00000201724 730 ntBASIC15.37■□□□□ 0.05
Uba3Q8C878 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Uba3Q8C878 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Uba3Q8C878 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Uba3Q8C878 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Uba3Q8C878 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Uba3Q8C878 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Uba3Q8C878 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Uba3Q8C878 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Uba3Q8C878 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Uba3Q8C878 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Uba3Q8C878 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Uba3Q8C878 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Uba3Q8C878 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.36■□□□□ 0.05
Uba3Q8C878 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Uba3Q8C878 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Uba3Q8C878 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.36■□□□□ 0.05
Uba3Q8C878 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Uba3Q8C878 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.36■□□□□ 0.05
Uba3Q8C878 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.36■□□□□ 0.05
Uba3Q8C878 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.36■□□□□ 0.05
Uba3Q8C878 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms