Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Mir8098-201ENSMUST00000184011 137 ntBASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Gm10060-201ENSMUST00000212002 111 ntBASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim4Q8C1Q6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Gm7153-201ENSMUST00000117092 455 ntBASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim4Q8C1Q6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Gm11452-201ENSMUST00000122376 690 ntBASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Gm4899-201ENSMUST00000178708 719 ntBASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms