Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.07■□□□□ 0
Trub1Q8C0D0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Trub1Q8C0D0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.07■□□□□ 0
Trub1Q8C0D0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trub1Q8C0D0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trub1Q8C0D0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.06■□□□□ 0
Trub1Q8C0D0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trub1Q8C0D0 Gm6973-201ENSMUST00000117080 721 ntBASIC15.06■□□□□ 0
Trub1Q8C0D0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.06■□□□□ 0
Trub1Q8C0D0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Gm27920-201ENSMUST00000183953 96 ntBASIC15.06■□□□□ 0
Trub1Q8C0D0 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.06■□□□□ 0
Trub1Q8C0D0 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.06■□□□□ 0
Trub1Q8C0D0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trub1Q8C0D0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trub1Q8C0D0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trub1Q8C0D0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Trub1Q8C0D0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trub1Q8C0D0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.06■□□□□ 0
Trub1Q8C0D0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trub1Q8C0D0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trub1Q8C0D0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trub1Q8C0D0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trub1Q8C0D0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trub1Q8C0D0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.05■□□□□ 0
Trub1Q8C0D0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.05■□□□□ 0
Trub1Q8C0D0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trub1Q8C0D0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.05■□□□□ 0
Trub1Q8C0D0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
Trub1Q8C0D0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trub1Q8C0D0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trub1Q8C0D0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.05■□□□□ -0
Trub1Q8C0D0 Gm14042-201ENSMUST00000120139 833 ntBASIC15.05■□□□□ -0
Trub1Q8C0D0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trub1Q8C0D0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.05■□□□□ -0
Trub1Q8C0D0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.05■□□□□ -0
Trub1Q8C0D0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.05■□□□□ -0
Trub1Q8C0D0 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.05■□□□□ -0
Trub1Q8C0D0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trub1Q8C0D0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trub1Q8C0D0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trub1Q8C0D0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trub1Q8C0D0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trub1Q8C0D0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trub1Q8C0D0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trub1Q8C0D0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trub1Q8C0D0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trub1Q8C0D0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trub1Q8C0D0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trub1Q8C0D0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trub1Q8C0D0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Trub1Q8C0D0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trub1Q8C0D0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trub1Q8C0D0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.04■□□□□ -0
Trub1Q8C0D0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.04■□□□□ -0
Trub1Q8C0D0 Gm11025-201ENSMUST00000140773 466 ntBASIC15.04■□□□□ -0
Trub1Q8C0D0 Gm8000-201ENSMUST00000188378 592 ntBASIC15.04■□□□□ -0
Trub1Q8C0D0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms