Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Gm8463-201ENSMUST00000208573 613 ntBASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.37□□□□□ -0.59
Chd9Q8BYH8 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.37□□□□□ -0.59
Chd9Q8BYH8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd9Q8BYH8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Gm27631-201ENSMUST00000184163 466 ntBASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Gm37835-201ENSMUST00000193305 361 ntBASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.36□□□□□ -0.59
Chd9Q8BYH8 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Gm6082-201ENSMUST00000215204 454 ntBASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Gm14381-201ENSMUST00000122105 414 ntBASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd9Q8BYH8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Gm4909-201ENSMUST00000118749 794 ntBASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.35□□□□□ -0.59
Chd9Q8BYH8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms