Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC20.54■□□□□ 0.88
Usp47Q8BY87 AC155729.1-201ENSMUST00000227758 544 ntBASIC20.54■□□□□ 0.88
Usp47Q8BY87 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp47Q8BY87 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Usp47Q8BY87 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC20.54■□□□□ 0.88
Usp47Q8BY87 Gm11960-202ENSMUST00000181063 2858 ntBASIC20.54■□□□□ 0.88
Usp47Q8BY87 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp47Q8BY87 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp47Q8BY87 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp47Q8BY87 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp47Q8BY87 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp47Q8BY87 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp47Q8BY87 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Usp47Q8BY87 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp47Q8BY87 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp47Q8BY87 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp47Q8BY87 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp47Q8BY87 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Usp47Q8BY87 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC20.53■□□□□ 0.88
Usp47Q8BY87 Mir8102-201ENSMUST00000184148 139 ntBASIC20.53■□□□□ 0.88
Usp47Q8BY87 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp47Q8BY87 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp47Q8BY87 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Usp47Q8BY87 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp47Q8BY87 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp47Q8BY87 AC124751.1-201ENSMUST00000222716 1408 ntBASIC20.53■□□□□ 0.88
Usp47Q8BY87 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp47Q8BY87 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp47Q8BY87 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Usp47Q8BY87 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Usp47Q8BY87 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Usp47Q8BY87 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp47Q8BY87 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp47Q8BY87 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp47Q8BY87 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp47Q8BY87 Gm4875-201ENSMUST00000118257 786 ntBASIC20.52■□□□□ 0.88
Usp47Q8BY87 Gm14719-201ENSMUST00000121891 340 ntBASIC20.52■□□□□ 0.88
Usp47Q8BY87 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Usp47Q8BY87 AC132863.2-201ENSMUST00000226643 799 ntBASIC20.52■□□□□ 0.88
Usp47Q8BY87 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp47Q8BY87 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp47Q8BY87 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp47Q8BY87 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Usp47Q8BY87 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp47Q8BY87 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Usp47Q8BY87 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp47Q8BY87 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp47Q8BY87 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp47Q8BY87 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp47Q8BY87 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Usp47Q8BY87 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp47Q8BY87 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Gm9856-201ENSMUST00000217077 2578 ntBASIC20.51■□□□□ 0.87
Usp47Q8BY87 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp47Q8BY87 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Gm12882-201ENSMUST00000121696 517 ntBASIC20.51■□□□□ 0.87
Usp47Q8BY87 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Usp47Q8BY87 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Usp47Q8BY87 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Cd63-ps-201ENSMUST00000145417 875 ntBASIC20.5■□□□□ 0.87
Usp47Q8BY87 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC20.5■□□□□ 0.87
Usp47Q8BY87 AC125206.2-201ENSMUST00000217454 574 ntBASIC20.5■□□□□ 0.87
Usp47Q8BY87 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Usp47Q8BY87 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Gm45667-201ENSMUST00000210380 1316 ntBASIC20.5■□□□□ 0.87
Usp47Q8BY87 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Usp47Q8BY87 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.49■□□□□ 0.87
Usp47Q8BY87 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp47Q8BY87 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms