Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Gm45747-201ENSMUST00000212203 999 ntBASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Carlr-201ENSMUST00000181515 2574 ntBASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4Q8BQZ5 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.17□□□□□ -0.14
Cpsf4Q8BQZ5 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms