Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh20Q8BIZ0 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.29□□□□□ -0.12
Pcdh20Q8BIZ0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh20Q8BIZ0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh20Q8BIZ0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh20Q8BIZ0 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.29□□□□□ -0.12
Pcdh20Q8BIZ0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh20Q8BIZ0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh20Q8BIZ0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh20Q8BIZ0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh20Q8BIZ0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh20Q8BIZ0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh20Q8BIZ0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh20Q8BIZ0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdh20Q8BIZ0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Gm23547-201ENSMUST00000158210 271 ntBASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Gm2213-201ENSMUST00000197485 688 ntBASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh20Q8BIZ0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh20Q8BIZ0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh20Q8BIZ0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh20Q8BIZ0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh20Q8BIZ0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh20Q8BIZ0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh20Q8BIZ0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh20Q8BIZ0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.27□□□□□ -0.12
Pcdh20Q8BIZ0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Pcdh20Q8BIZ0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh20Q8BIZ0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh20Q8BIZ0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh20Q8BIZ0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 Gm14494-201ENSMUST00000118786 435 ntBASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh20Q8BIZ0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 Gm8318-201ENSMUST00000182954 872 ntBASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh20Q8BIZ0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms