Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Depdc1bQ8BH88 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.88■□□□□ 0.13
Depdc1bQ8BH88 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.88■□□□□ 0.13
Depdc1bQ8BH88 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Depdc1bQ8BH88 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Depdc1bQ8BH88 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Depdc1bQ8BH88 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Depdc1bQ8BH88 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Depdc1bQ8BH88 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Depdc1bQ8BH88 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Depdc1bQ8BH88 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Depdc1bQ8BH88 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Gm15427-201ENSMUST00000117288 531 ntBASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Depdc1bQ8BH88 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Gm14701-201ENSMUST00000117156 348 ntBASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Gm12008-201ENSMUST00000117791 755 ntBASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Gm15920-201ENSMUST00000118998 402 ntBASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Gm45747-201ENSMUST00000212203 999 ntBASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Gm8396-201ENSMUST00000057361 823 ntBASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Depdc1bQ8BH88 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Depdc1bQ8BH88 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Depdc1bQ8BH88 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Depdc1bQ8BH88 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Depdc1bQ8BH88 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Depdc1bQ8BH88 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Depdc1bQ8BH88 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Depdc1bQ8BH88 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Depdc1bQ8BH88 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Depdc1bQ8BH88 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Depdc1bQ8BH88 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Depdc1bQ8BH88 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Depdc1bQ8BH88 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Depdc1bQ8BH88 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.85■□□□□ 0.13
Depdc1bQ8BH88 Gm45612-201ENSMUST00000211320 160 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms