Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Usp6nlQ80XC3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp6nlQ80XC3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Usp6nlQ80XC3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Usp6nlQ80XC3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Usp6nlQ80XC3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Usp6nlQ80XC3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Gm9726-201ENSMUST00000180321 678 ntBASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Gm10766-202ENSMUST00000194123 606 ntBASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Gm45384-201ENSMUST00000210451 277 ntBASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp6nlQ80XC3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Gm9797-201ENSMUST00000052902 613 ntBASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp6nlQ80XC3 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 BC001981-202ENSMUST00000191393 1545 ntBASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Gm12091-201ENSMUST00000146791 830 ntBASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Gm37917-201ENSMUST00000194711 392 ntBASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 AA619741-201ENSMUST00000195095 646 ntBASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms