Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Gm43138-201ENSMUST00000199123 708 ntBASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Gm5363-201ENSMUST00000211927 938 ntBASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Gm4271-201ENSMUST00000174444 973 ntBASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr5Q80TP3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Gm14381-201ENSMUST00000122105 414 ntBASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Gm7029-201ENSMUST00000173226 450 ntBASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Gm12203-201ENSMUST00000118235 598 ntBASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Gm12209-201ENSMUST00000120089 596 ntBASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.35□□□□□ -0.43
Ubr5Q80TP3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Gm37986-201ENSMUST00000193285 383 ntBASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr5Q80TP3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ubr5Q80TP3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms