Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Gm9824-201ENSMUST00000178707 561 ntBASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Gm27838-201ENSMUST00000184829 128 ntBASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Gm8515-201ENSMUST00000194852 576 ntBASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Gm6888-201ENSMUST00000221983 706 ntBASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf38bQ80SY5 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Gm14767-201ENSMUST00000121559 586 ntBASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Gm11434-201ENSMUST00000122379 629 ntBASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Mir6420-201ENSMUST00000185032 102 ntBASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Gm45384-201ENSMUST00000210451 277 ntBASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf38bQ80SY5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Gm14928-201ENSMUST00000120198 477 ntBASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Gm43630-201ENSMUST00000201550 776 ntBASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Gm18246-201ENSMUST00000221023 728 ntBASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms